Index _ | A | B | C | D | E | F | G | I | K | L | M | N | P | Q | R | S | T | X _ __getstate__() (quadsv.kernels.Kernel method) __init__() (quadsv.detector.PatternDetector method) (quadsv.fft.FFTKernel method) (quadsv.kernels.Kernel method) (quadsv.kernels.SpatialKernel method) __repr__() (quadsv.fft.FFTKernel method) __setstate__() (quadsv.kernels.Kernel method) __str__() (quadsv.fft.FFTKernel method) A adata (quadsv.detector.PatternDetector attribute) B build_kernel_from_coordinates() (quadsv.detector.PatternDetector method), [1] build_kernel_from_obsp() (quadsv.detector.PatternDetector method), [1] C compute_null_params() (in module quadsv.statistics) compute_qstat() (quadsv.detector.PatternDetector method), [1] compute_rstat() (quadsv.detector.PatternDetector method), [1] compute_torus_distance_matrix() (in module quadsv.utils) convert_visium_to_physical() (in module quadsv.utils) D data (quadsv.kernels.SpatialKernel attribute) E eigenvalues() (quadsv.fft.FFTKernel method) (quadsv.kernels.Kernel method) F FFTKernel (class in quadsv.fft) from_coordinates() (quadsv.kernels.SpatialKernel class method) from_matrix() (quadsv.kernels.SpatialKernel class method) G get_rect_coords() (in module quadsv.utils) get_visium_coords() (in module quadsv.utils) I is_implicit (quadsv.kernels.Kernel attribute) K Kernel (class in quadsv.kernels) kernel_ (quadsv.detector.PatternDetector attribute) kernel_method_ (quadsv.detector.PatternDetector attribute) kernel_params_ (quadsv.detector.PatternDetector attribute) L liu_sf() (in module quadsv.statistics) M method (quadsv.fft.FFTKernel attribute) (quadsv.kernels.Kernel attribute) mode (quadsv.kernels.SpatialKernel attribute) module quadsv.detector quadsv.fft quadsv.kernels quadsv.statistics quadsv.utils N n (quadsv.detector.PatternDetector attribute) (quadsv.kernels.Kernel attribute) P params (quadsv.fft.FFTKernel attribute) (quadsv.kernels.Kernel attribute) PatternDetector (class in quadsv.detector) Q quadsv.detector module quadsv.fft module quadsv.kernels module quadsv.statistics module quadsv.utils module R realization() (quadsv.kernels.Kernel method) S spatial_q_test() (in module quadsv.statistics) spatial_q_test_fft() (in module quadsv.fft) spatial_r_test() (in module quadsv.statistics) spatial_r_test_fft() (in module quadsv.fft) SpatialKernel (class in quadsv.kernels) spectrum (quadsv.fft.FFTKernel attribute) square_trace() (quadsv.fft.FFTKernel method) (quadsv.kernels.Kernel method) T topology (quadsv.fft.FFTKernel attribute) trace() (quadsv.fft.FFTKernel method) (quadsv.kernels.Kernel method) X xtKx() (quadsv.fft.FFTKernel method) (quadsv.kernels.Kernel method)